Package: mbX 0.1.3

mbX: A Comprehensive Microbiome Data Processing Pipeline

Provides tools for cleaning, processing, and preparing microbiome sequencing data (e.g., 16S rRNA) for downstream analysis. Supports CSV, TXT, and 'Excel' file formats. The main function, ezclean(), automates microbiome data transformation, including format validation, transposition, numeric conversion, and metadata integration. Also ensures efficient handling of taxonomic levels, resolves duplicated taxa entries, and outputs a well-structured, analysis-ready dataset.

Authors:Utsav Lamichhane [aut, cre]

mbX_0.1.3.tar.gz
mbX_0.1.3.zip(r-4.5)mbX_0.1.3.zip(r-4.4)mbX_0.1.3.zip(r-4.3)
mbX_0.1.3.tgz(r-4.5-any)mbX_0.1.3.tgz(r-4.4-any)mbX_0.1.3.tgz(r-4.3-any)
mbX_0.1.3.tar.gz(r-4.5-noble)mbX_0.1.3.tar.gz(r-4.4-noble)
mbX_0.1.3.tgz(r-4.4-emscripten)mbX_0.1.3.tgz(r-4.3-emscripten)
mbX.pdf |mbX.html✨
mbX/json (API)

# Install 'mbX' in R:
install.packages('mbX', repos = c('https://utsavlamichhane.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.70 score 2 exports 46 dependencies

Last updated 10 days agofrom:554ac35aa5. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 04 2025
R-4.5-winOKMar 04 2025
R-4.5-macOKMar 04 2025
R-4.5-linuxOKMar 04 2025
R-4.4-winOKMar 04 2025
R-4.4-macOKMar 04 2025
R-4.4-linuxOKMar 04 2025
R-4.3-winOKMar 04 2025
R-4.3-macOKMar 04 2025

Exports:ezcleanezviz

Dependencies:cellrangerclicolorspacecpp11crayondplyrfansifarvergenericsggplot2gluegtablehmsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmeopenxlsxpillarpkgconfigprettyunitsprogresspurrrR6RColorBrewerRcppreadxlrematchrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithrzip

mbX: A Microbiome Data Cleaning and Visualization Package

Utsav Lamichhane

Rendered frommbX_vignette.Rmdusingknitr::rmarkdownon Mar 04 2025.

Last update: 2025-03-03
Started: 2025-03-03